Sustainable production of formic acid from CO2 by a novel immobilized mutant formate dehydrogenase

dc.authoridServili, Burak/0000-0001-8869-6302
dc.authoridTülek, Ahmet/0000-0003-1079-7837
dc.authoridYildirim, Deniz/0000-0002-5041-8160
dc.authoridTülek, Ahmet/0000-0003-1079-7837
dc.authoridEssiz, Sebnem/0000-0002-5476-4722
dc.authorwosidServili, Burak/ABF-2780-2021
dc.authorwosidTülek, Ahmet/ITV-5371-2023
dc.authorwosidYildirim, Deniz/C-2929-2018
dc.authorwosidTülek, Ahmet/S-8916-2018
dc.contributor.authorEşsiz, Şebnem
dc.contributor.authorServili, Burak
dc.contributor.authorServili, Burak
dc.contributor.authorEssiz, Sebnem
dc.contributor.authorBinay, Baris
dc.contributor.authorYildirim, Deniz
dc.date.accessioned2023-10-19T15:11:40Z
dc.date.available2023-10-19T15:11:40Z
dc.date.issued2023
dc.department-temp[Tulek, Ahmet; Binay, Baris] Gebze Tech Univ, Fac Engn, Dept Bioengn, TR-41400 Kocaeli, Turkiye; [Gunay, Elif] Gebze Tech Univ, Inst Nat & Appl Sci, Dept Mol Biol & Genet, TR-41400 Kocaeli, Turkiye; [Servili, Burak; Essiz, Sebnem] Kadir Has Univ, Grad Sch Sci & Engn, Bioinformat & Genet Program, TR-34083 Istanbul, Turkiye; [Essiz, Sebnem] Kadir Has Univ, Dept Engn & Nat Sci, Mol Biol & Genet, TR-34083 Istanbul, Turkiye; [Binay, Baris] Bauzyme Biotechnol Co, Gebze Tech Univ Technopark Reg, TR-41400 Kocaeli, Turkiye; [Yildirim, Deniz] Cukurova Univ, Fac Ceyhan Engn, Dept Chem Engn, TR-01950 Adana, Turkiyeen_US
dc.description.abstractFormate dehydrogenase (NAD+-dependent FDH) is an enzyme that catalyzes the reversible oxidation of formate to CO2 while reducing NAD+ to NADH. The enzyme has been used in industrial and chemical applications for NADH regeneration for a long time. However, discovering the unique ability of FDHs, which is to reduce CO2 and produce formic acid, leads studies focusing on discovering or redesigning FDHs. Despite using various protein engineering techniques, these studies mostly target the same catalytic site amino acids of FDHs. Here, for the first time, the effect of an Asp188 mutation on a potential allosteric site in NAD+-dependent CtFDH around its subunit-subunit interface was studied by molecular modelling and simulation in the presence of bicarbonate and formate. Biochemical and kinetic characterization of this Asp188Arg mutant and wild type CtFDH enzymes were performed in detail. Both enzymes were also immobilized on newly synthesized MWCNT-Ni-O-Si/Ald and MWCNT-Ni-O-Si/Glu supports designed to overcome well-known CtFDH stability problems including thermostability and reuse resistance. Integrating mutation and immobilization provided about a 25-fold increase in catalytic efficiency for carbonate activity. The one-way ANOVA analysis also ensured significant effect of the mutation and immobilization on kinetic constants. After characterizing the immobilization of highly purified wild type and mutant enzyme with instrumental analysis techniques, the thermal stability of MWCNT-Ni-Si@wtCtFDH and MWCNT-Ni-Si@mt-CtFDH was found to increase about 11-and 18-fold, respectively, compared to their free counterparts at 50 degrees C. The mutant CtFDH and its immobilized counterpart produced around 2-fold more formic acid than those of wild type CtFDH and its immobilized counterpart under the same conditions. MWCNT-Ni-Si@wt-CtFDH and MWCNT-Ni-Si@mt-CtFDH remained around 82 % and 86 % of their initial activities respectively after lots of recycling. Integration of subunit interface amino acid position of NAD+ dependent FDHs engineering and immobilization provides a new insight can be scientifically and rationally employed for this current application FDHs as a solution to produce formic acids from renewable sources.en_US
dc.identifier.citation12
dc.identifier.doi10.1016/j.seppur.2022.123090en_US
dc.identifier.issn1383-5866
dc.identifier.issn1873-3794
dc.identifier.scopus2-s2.0-85145833343en_US
dc.identifier.scopusqualityQ1
dc.identifier.urihttps://doi.org/10.1016/j.seppur.2022.123090
dc.identifier.urihttps://hdl.handle.net/20.500.12469/5164
dc.identifier.volume309en_US
dc.identifier.wosWOS:000916222000001en_US
dc.identifier.wosqualityQ1
dc.khas20231019-WoSen_US
dc.language.isoenen_US
dc.publisherElsevieren_US
dc.relation.ispartofSeparation and Purification Technologyen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectChaetomium-Thermophilum FormateEn_Us
dc.subjectCarbon NanotubesEn_Us
dc.subjectCovalent ImmobilizationEn_Us
dc.subjectConversionEn_Us
dc.subjectReductionEn_Us
dc.subjectDioxideEn_Us
dc.subjectSiteEn_Us
dc.subjectHydrogenationEn_Us
dc.subjectBicarbonateEn_Us
dc.subjectMechanismEn_Us
dc.subjectChaetomium-Thermophilum Formate
dc.subjectCarbon Nanotubes
dc.subjectCovalent Immobilization
dc.subjectConversion
dc.subjectReduction
dc.subjectDioxide
dc.subjectFormate dehydrogenaseen_US
dc.subjectSite
dc.subjectSubunit-subunit interfaceen_US
dc.subjectHydrogenation
dc.subjectSite-directed mutagenesisen_US
dc.subjectBicarbonate
dc.subjectMWCNT-Nien_US
dc.subjectMechanism
dc.subjectFormic aciden_US
dc.titleSustainable production of formic acid from CO2 by a novel immobilized mutant formate dehydrogenaseen_US
dc.typeArticleen_US
dspace.entity.typePublication
relation.isAuthorOfPublicationa83da4e2-c934-413a-886f-2438d0a3fd58
relation.isAuthorOfPublication8af409fe-e6f2-42c7-ae0b-7d26bd180328
relation.isAuthorOfPublication.latestForDiscoverya83da4e2-c934-413a-886f-2438d0a3fd58

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