A comparison of fluorescence and UV-visible spectrometry techniques for thermal phase transitions of agarose gels

dc.contributor.authorArda, Ertan
dc.contributor.authorKara, Selim
dc.contributor.authorMergen, Ömer Bahadır
dc.contributor.authorPekcan, Önder
dc.date.accessioned2019-06-27T08:02:25Z
dc.date.available2019-06-27T08:02:25Z
dc.date.issued2015
dc.departmentFakülteler, Mühendislik ve Doğa Bilimleri Fakültesi, Biyoinformatik ve Genetik Bölümüen_US
dc.description.abstractIn this study thermoreversible phase transitions of high (HMP) and low (LMP) melting point agarose gels were investigated by using the UV-vis and fluorescence spectroscopy techniques. Pyranine was added to the aqueous solution of agarose as a fluorescence-probe. Transmitted light (I (tr)) and fluorescence emission (I (fl)) intensities from the gel samples with different agarose concentrations were monitored during the heating (gel-sol) and cooling (sol-gel) processes. For the both techniques gel-sol (T (gs)) and sol-gel (T (sg)) transition temperatures were determined from the first derivatives of the sigmoidal transition paths. It was observed that the critical transition temperatures obtained from UV-vis and fluorescence data slightly increased depending on the agarose type and concentration and those values were found to be in accord with each other. Transition activation energies were determined using the Arrhenius type equation and were found to be strongly correlated with the agarose content in the gel system. The produced gel-sol (Delta E (gs)) and sol-gel (Delta E (sg)) transition energies from the fluorescence data were found to be lower than that of the UV-vis data which was attributed to the temperature-dependent fluorescence quenching effect.en_US]
dc.identifier.citation6
dc.identifier.doi10.1007/s00289-014-1265-4en_US
dc.identifier.endpage175
dc.identifier.issn0170-0839en_US
dc.identifier.issn1436-2449en_US
dc.identifier.issn0170-0839
dc.identifier.issn1436-2449
dc.identifier.issue2
dc.identifier.scopus2-s2.0-84925521980en_US
dc.identifier.scopusqualityQ2
dc.identifier.startpage157en_US
dc.identifier.urihttps://hdl.handle.net/20.500.12469/616
dc.identifier.urihttps://doi.org/10.1007/s00289-014-1265-4
dc.identifier.volume72en_US
dc.identifier.wosWOS:000348982400001en_US
dc.identifier.wosqualityN/A
dc.language.isoenen_US
dc.publisherSpringeren_US
dc.relation.journalPolymer Bulletinen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.rightsinfo:eu-repo/semantics/openAccessen_US
dc.subjectAgaroseen_US
dc.subjectTransition energyen_US
dc.subjectCritical temperatureen_US
dc.subjectFluorescence probeen_US
dc.subjectThermoreversible phase transitionen_US
dc.titleA comparison of fluorescence and UV-visible spectrometry techniques for thermal phase transitions of agarose gelsen_US
dc.typeArticleen_US
dspace.entity.typePublication

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