An Integrated Model for Visualizing Biclusters From Gene Expression Data and Ppi Networks
| gdc.relation.journal | ISB 2010 Proceedings - International Symposium on Biocomputing | en_US |
| dc.contributor.author | Aladağ, Ahmet Emre | |
| dc.contributor.author | Erten, Cesim | |
| dc.contributor.author | Sözdinler, Melih | |
| dc.date.accessioned | 2019-06-28T11:11:24Z | |
| dc.date.available | 2019-06-28T11:11:24Z | |
| dc.date.issued | 2010 | |
| dc.description.abstract | We provide a model to integrate the visualization of biclusters extracted from gene expresion data and the underlying PPI networks. Such an integration conveys the biologically relevant interconnection between these two structures inferred from biological experiments. We model the reliabilities of the structures using directed graphs with vertex and edge weights. The resulting graphs are drawn using appropriate weighted modifications of the algorithms necessary for the layered drawings of directed graphs. We provide applications of the proposed visualization model on the S. cerevisiae dataset. Copyright 2010 ACM. | en_US] |
| dc.identifier.citationcount | 0 | |
| dc.identifier.doi | 10.1145/1722024.1722052 | en_US |
| dc.identifier.isbn | 9781605587226 | |
| dc.identifier.scopus | 2-s2.0-77951611537 | en_US |
| dc.identifier.uri | https://hdl.handle.net/20.500.12469/1573 | |
| dc.identifier.uri | https://doi.org/10.1145/1722024.1722052 | |
| dc.language.iso | en | en_US |
| dc.relation.ispartof | Proceedings of the International Symposium on Biocomputing | |
| dc.rights | info:eu-repo/semantics/openAccess | en_US |
| dc.subject | Bicluster | en_US |
| dc.subject | PPI network | en_US |
| dc.subject | Visualization | en_US |
| dc.title | An Integrated Model for Visualizing Biclusters From Gene Expression Data and Ppi Networks | en_US |
| dc.type | Conference Object | en_US |
| dspace.entity.type | Publication | |
| gdc.author.institutional | Aladağ, Ahmet Emre | en_US |
| gdc.author.institutional | Erten, Cesim | |
| gdc.bip.impulseclass | C5 | |
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| gdc.bip.popularityclass | C5 | |
| gdc.coar.access | open access | |
| gdc.coar.type | text::conference output | |
| gdc.description.department | Fakülteler, Mühendislik ve Doğa Bilimleri Fakültesi, Bilgisayar Mühendisliği Bölümü | en_US |
| gdc.description.endpage | 8 | |
| gdc.description.publicationcategory | Konferans Öğesi - Uluslararası - Kurum Öğretim Elemanı | en_US |
| gdc.description.startpage | 1 | |
| gdc.identifier.openalex | W1994916407 | |
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| gdc.oaire.influence | 2.5942106E-9 | |
| gdc.oaire.isgreen | true | |
| gdc.oaire.keywords | PPI network | |
| gdc.oaire.keywords | Bicluster | |
| gdc.oaire.keywords | Visualization | |
| gdc.oaire.popularity | 4.997645E-10 | |
| gdc.oaire.publicfunded | false | |
| gdc.oaire.sciencefields | 0301 basic medicine | |
| gdc.oaire.sciencefields | 03 medical and health sciences | |
| gdc.oaire.sciencefields | 0206 medical engineering | |
| gdc.oaire.sciencefields | 02 engineering and technology | |
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