Mathematical Characterization of Thermo-reversible Phase Transitions of Agarose Gels
dc.contributor.author | Bilge, Ayşe Hümeyra | |
dc.contributor.author | Pekcan, Önder | |
dc.contributor.author | Kara, Selim | |
dc.contributor.author | Bilge, Ayşe Hümeyra | |
dc.date.accessioned | 2019-06-27T08:01:12Z | |
dc.date.available | 2019-06-27T08:01:12Z | |
dc.date.issued | 2018 | |
dc.department | Fakülteler, Mühendislik ve Doğa Bilimleri Fakültesi, Biyoinformatik ve Genetik Bölümü | en_US |
dc.department | Fakülteler, Mühendislik ve Doğa Bilimleri Fakültesi, Elektrik-Elektronik Mühendisliği Bölümü | en_US |
dc.department | Fakülteler, Mühendislik ve Doğa Bilimleri Fakültesi, Endüstri Mühendisliği Bölümü | en_US |
dc.description.abstract | The thermal phase transition temperatures of high (HMP) and low melting point (LMP) agarose gels were investigated by using UV-vis spectroscopy techniques. Transmitted light intensities from the gel samples with different agarose concentrations were monitored during the heating (gel-sol) and cooling (sol-gel) processes. It was observed that the transition temperatures T-m defined as the location of the maximum of the first derivative of the sigmoidal transition paths obtained from the UV-vis technique slightly increased by increasing the agarose concentration in both the HMP and LMP samples. Here we express the phase transitions of the agar-water system as a representative of reversible physical gels in terms of a modified Susceptible-Infected-Susceptible epidemic model whose solutions are the well-known 5-point sigmoidal curves. The gel point is hard to determine experimentally and various computational techniques are used for its characterization. Based on previous work we locate the gel point T-0 of sol-gel and gel-sol transitions in terms of the horizontal shift in the sigmoidal transition curve. For the gel-sol transition (heating) T-0 is greater than T-m i.e. later in time and the difference between T-0 and T-m is reduced as the agarose content increases. For the sol-gel transition (cooling) T-0 is again greater than T-m but it is earlier in time for all agarose contents and moves forward in time and gets closer to T-m as the agarose content increases. | en_US] |
dc.identifier.citation | 8 | |
dc.identifier.doi | 10.1080/00222348.2018.1463052 | en_US |
dc.identifier.endpage | 376 | |
dc.identifier.issn | 0022-2348 | en_US |
dc.identifier.issn | 1525-609X | en_US |
dc.identifier.issn | 0022-2348 | |
dc.identifier.issn | 1525-609X | |
dc.identifier.issue | 5 | |
dc.identifier.scopus | 2-s2.0-85046020088 | en_US |
dc.identifier.scopusquality | Q3 | |
dc.identifier.startpage | 364 | en_US |
dc.identifier.uri | https://hdl.handle.net/20.500.12469/294 | |
dc.identifier.volume | 57 | en_US |
dc.identifier.wos | WOS:000435693300004 | en_US |
dc.identifier.wosquality | N/A | |
dc.institutionauthor | Öğrenci, Arif Selçuk | en_US |
dc.institutionauthor | Pekcan, Önder | en_US |
dc.institutionauthor | Bilge, Ayşe Hümeyra | en_US |
dc.language.iso | en | en_US |
dc.publisher | Taylor & Francis Inc | en_US |
dc.relation.publicationcategory | Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı | en_US |
dc.rights | info:eu-repo/semantics/closedAccess | en_US |
dc.subject | Agarose | en_US |
dc.subject | Gel point | en_US |
dc.subject | Generalized logistic curve | en_US |
dc.subject | Sol-gel and gel-sol transition | en_US |
dc.title | Mathematical Characterization of Thermo-reversible Phase Transitions of Agarose Gels | en_US |
dc.type | Article | en_US |
dspace.entity.type | Publication | |
relation.isAuthorOfPublication | 1b50a6b2-7290-44da-b8d5-f048fea8b315 | |
relation.isAuthorOfPublication.latestForDiscovery | 1b50a6b2-7290-44da-b8d5-f048fea8b315 |