Mathematical Characterization of Thermo-Reversible Phase Transitions of Agarose Gels

dc.contributor.author Öğrenci, Arif Selçuk
dc.contributor.author Pekcan, Önder
dc.contributor.author Kara, Selim
dc.contributor.author Bilge, Ayşe Hümeyra
dc.date.accessioned 2019-06-27T08:01:12Z
dc.date.available 2019-06-27T08:01:12Z
dc.date.issued 2018
dc.description.abstract The thermal phase transition temperatures of high (HMP) and low melting point (LMP) agarose gels were investigated by using UV-vis spectroscopy techniques. Transmitted light intensities from the gel samples with different agarose concentrations were monitored during the heating (gel-sol) and cooling (sol-gel) processes. It was observed that the transition temperatures T-m defined as the location of the maximum of the first derivative of the sigmoidal transition paths obtained from the UV-vis technique slightly increased by increasing the agarose concentration in both the HMP and LMP samples. Here we express the phase transitions of the agar-water system as a representative of reversible physical gels in terms of a modified Susceptible-Infected-Susceptible epidemic model whose solutions are the well-known 5-point sigmoidal curves. The gel point is hard to determine experimentally and various computational techniques are used for its characterization. Based on previous work we locate the gel point T-0 of sol-gel and gel-sol transitions in terms of the horizontal shift in the sigmoidal transition curve. For the gel-sol transition (heating) T-0 is greater than T-m i.e. later in time and the difference between T-0 and T-m is reduced as the agarose content increases. For the sol-gel transition (cooling) T-0 is again greater than T-m but it is earlier in time for all agarose contents and moves forward in time and gets closer to T-m as the agarose content increases. en_US]
dc.identifier.citationcount 8
dc.identifier.doi 10.1080/00222348.2018.1463052 en_US
dc.identifier.issn 0022-2348 en_US
dc.identifier.issn 1525-609X en_US
dc.identifier.issn 0022-2348
dc.identifier.issn 1525-609X
dc.identifier.scopus 2-s2.0-85046020088 en_US
dc.identifier.uri https://hdl.handle.net/20.500.12469/294
dc.language.iso en en_US
dc.publisher Taylor & Francis Inc en_US
dc.relation.ispartof Journal of Macromolecular Science, Part B
dc.rights info:eu-repo/semantics/closedAccess en_US
dc.subject Agarose en_US
dc.subject Gel point en_US
dc.subject Generalized logistic curve en_US
dc.subject Sol-gel and gel-sol transition en_US
dc.title Mathematical Characterization of Thermo-Reversible Phase Transitions of Agarose Gels en_US
dc.type Article en_US
dspace.entity.type Publication
gdc.author.institutional Öğrenci, Arif Selçuk en_US
gdc.author.institutional Bilge, Ayşe Hümeyra
gdc.author.institutional Bilge, Ayşe Hümeyra en_US
gdc.author.institutional Pekcan, Mehmet Önder
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gdc.bip.influenceclass C5
gdc.bip.popularityclass C4
gdc.coar.access metadata only access
gdc.coar.type text::journal::journal article
gdc.description.department Fakülteler, Mühendislik ve Doğa Bilimleri Fakültesi, Biyoinformatik ve Genetik Bölümü en_US
gdc.description.department Fakülteler, Mühendislik ve Doğa Bilimleri Fakültesi, Elektrik-Elektronik Mühendisliği Bölümü en_US
gdc.description.department Fakülteler, Mühendislik ve Doğa Bilimleri Fakültesi, Endüstri Mühendisliği Bölümü en_US
gdc.description.endpage 376
gdc.description.issue 5
gdc.description.publicationcategory Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı en_US
gdc.description.scopusquality Q3
gdc.description.startpage 364 en_US
gdc.description.volume 57 en_US
gdc.description.wosquality Q4
gdc.identifier.openalex W2605153376
gdc.identifier.wos WOS:000435693300004 en_US
gdc.oaire.accesstype BRONZE
gdc.oaire.diamondjournal false
gdc.oaire.impulse 2.0
gdc.oaire.influence 2.9997216E-9
gdc.oaire.isgreen true
gdc.oaire.keywords Helix
gdc.oaire.keywords Generalized logistic curve
gdc.oaire.keywords Epidemic Models
gdc.oaire.keywords Generalized Logistic Curve
gdc.oaire.keywords Systems
gdc.oaire.keywords FOS: Physical sciences
gdc.oaire.keywords Gel Point
gdc.oaire.keywords Gel point
gdc.oaire.keywords Condensed Matter - Soft Condensed Matter
gdc.oaire.keywords Fluorescence
gdc.oaire.keywords Sol-Gel And Gel-Sol Transition
gdc.oaire.keywords Agarose
gdc.oaire.keywords Soft Condensed Matter (cond-mat.soft)
gdc.oaire.keywords Gelation Mechanism
gdc.oaire.keywords Networks
gdc.oaire.keywords Kappa-Carrageenan Gels
gdc.oaire.keywords Sol-gel and gel-sol transition
gdc.oaire.popularity 8.222324E-9
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gdc.oaire.sciencefields 02 engineering and technology
gdc.oaire.sciencefields 01 natural sciences
gdc.oaire.sciencefields 0104 chemical sciences
gdc.oaire.sciencefields 0210 nano-technology
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gdc.opencitations.count 9
gdc.plumx.mendeley 17
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