Discovery of new azoles with potent activity against Candida spp. and Candida albicans biofilms through virtual screening

dc.contributor.author Sari, Suat
dc.contributor.author Kart, Didem
dc.contributor.author Ozturk, Naile
dc.contributor.author Kaynak, F. Betul
dc.contributor.author Gencel, Melis
dc.contributor.author Taskor, Gulce
dc.contributor.author Karakurt, Arzu
dc.date.accessioned 2023-10-19T15:11:41Z
dc.date.available 2023-10-19T15:11:41Z
dc.date.issued 2019
dc.description.abstract Systemic candidiasis is a rampant bloodstream infection of Candida spp. and C. albicans is the major pathogen isolated from infected humans. Azoles, the most common class of antifungals which suffer from increasing resistance, and especially intrinsically resistant non-albicans Candida (NAC) species, act by inhibiting fungal lanosterol 14 alpha-demethylase (CYP51). In this study we identified a number of azole compounds in 1-(2,4-dichlorophenyl)-2-(1H-imidazol-1-yl)ethanol/ethanone oxime ester structure through virtual screening using consensus scoring approach, synthesized and tested them for their antifungal properties. We reached several hits with potent activity against azole-susceptible and azoleresistant Candida spp. as well as biofilms of C albicans. 5i's minimum inhibitor concentration (MIC) was 0.125 mu g/ml against C. albicans, 0.5 mu g/ml against C. krusei and 1 mu g/ml against azole-resistant C. tropicalis isolate. Considering the MIC values of fluconazole against these fungi (0.5, 32 and 512 mu g/ml, respectively), 5i emerged as a highly potent derivative. The minimum biofilm inhibitor concentration (MBIC) of 5c, 5j, and 5p were 0.5 mu g/ml (and 5i was 2 mu g/ml) against C. albicans biofilms, lower than that of amphotericin B (4 mu g/ml), a first-line antifungal with antibiofilm activity. In addition, the active compounds showed neglectable toxicity to human monocytic cell line. We further analyzed the docking poses of the active compounds in C. albicans CYP51 (CACYP51) homology model catalytic site and identified molecular interactions in agreement with those of known azoles with fungal CYP51s and mutagenesis studies of CACYP51. We observed the stability of CACYP51 in complex with 5i in molecular dynamics simulations. (C) 2019 Elsevier Masson SAS. All rights reserved. en_US
dc.description.sponsorship Scientific and Technological Research Council of Turkey (TUBITAK) [1155387]; Hacettepe University Scientific Research Projects Coordination Unit [014 D09 301 001-703, TPT-2015-6794, TPT-2018-16666] en_US
dc.description.sponsorship This study was funded by grants from The Scientific and Technological Research Council of Turkey (11)BITAK) (1155387) and Hacettepe University Scientific Research Projects Coordination Unit (014 D09 301 001-703, TPT-2015-6794, TPT-2018-16666). en_US
dc.identifier.citationcount 17
dc.identifier.doi 10.1016/j.ejmech.2019.06.083 en_US
dc.identifier.issn 0223-5234
dc.identifier.issn 1768-3254
dc.identifier.uri https://doi.org/10.1016/j.ejmech.2019.06.083
dc.identifier.uri https://hdl.handle.net/20.500.12469/5168
dc.khas 20231019-WoS en_US
dc.language.iso en en_US
dc.publisher Elsevier France-Editions Scientifiques Medicales Elsevier en_US
dc.relation.ispartof European Journal of Medicinal Chemistry en_US
dc.rights info:eu-repo/semantics/closedAccess en_US
dc.subject General Force-Field En_Us
dc.subject Antifungal Activity En_Us
dc.subject Molecular-Dynamics En_Us
dc.subject Accurate Docking En_Us
dc.subject Derivatives En_Us
dc.subject Protein En_Us
dc.subject Design En_Us
dc.subject Glide En_Us
dc.subject Cyp51 En_Us
dc.subject Constraints En_Us
dc.subject General Force-Field
dc.subject Antifungal Activity
dc.subject Molecular-Dynamics
dc.subject Accurate Docking
dc.subject Consensus scoring en_US
dc.subject Derivatives
dc.subject Azoles en_US
dc.subject Protein
dc.subject Candida albicans en_US
dc.subject Design
dc.subject Biofilm en_US
dc.subject Glide
dc.subject Cytotoxicity en_US
dc.subject Cyp51
dc.subject Molecular docking en_US
dc.subject Constraints
dc.subject Molecular dynamics simulations en_US
dc.title Discovery of new azoles with potent activity against Candida spp. and Candida albicans biofilms through virtual screening en_US
dc.type Article en_US
dspace.entity.type Publication
gdc.author.id Taşkor Önel, Gülce/0000-0002-9375-2329
gdc.author.id Karakurt, Arzu/0000-0003-2209-0871
gdc.author.id Ozturk, Naile/0000-0002-7617-8433
gdc.author.id SARI, SUAT/0000-0002-8248-4218
gdc.author.id Essiz, Sebnem/0000-0002-5476-4722
gdc.author.wosid Taşkor Önel, Gülce/T-6942-2017
gdc.author.wosid Karakurt, Arzu/ABH-9340-2020
gdc.author.wosid Ozturk, Naile/F-3650-2017
gdc.author.wosid SARI, SUAT/A-5249-2017
gdc.bip.impulseclass C4
gdc.bip.influenceclass C5
gdc.bip.popularityclass C4
gdc.coar.access metadata only access
gdc.coar.type text::journal::journal article
gdc.description.departmenttemp [Sari, Suat; Sarac, Selma; Dalkara, Sevim] Hacettepe Univ, Fac Pharm, Dept Pharmaceut Chem, TR-06100 Ankara, Turkey; [Kart, Didem] Hacettepe Univ, Fac Pharm, Dept Pharmaceut Microbiol, TR-06100 Ankara, Turkey; [Ozturk, Naile] Hacettepe Univ, Fac Pharm, Dept Pharmaceut Technol, TR-06100 Ankara, Turkey; [Ozturk, Naile] Inonu Univ, Fac Pharm, Dept Pharmaceut Technol, TR-44280 Malatya, Turkey; [Kaynak, F. Betul; Essiz, Sebnem] Hacettepe Univ, Fac Engn, Dept Engn Phys, TR-06800 Ankara, Turkey; [Gencel, Melis] Kadir Has Univ, Fac Engn & Nat Sci, Dept Bioinformat & Genet, TR-34083 Istanbul, Turkey; [Taskor, Gulce] Hacettepe Univ, Fac Pharm, Dept Basic Pharmaceut Sci, TR-06100 Ankara, Turkey; [Karakurt, Arzu] Inonu Univ, Fac Pharm, Dept Pharmaceut Chem, TR-44280 Malatya, Turkey en_US
gdc.description.endpage 648 en_US
gdc.description.publicationcategory Makale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanı en_US
gdc.description.scopusquality Q1
gdc.description.startpage 634 en_US
gdc.description.volume 179 en_US
gdc.description.wosquality Q1
gdc.identifier.openalex W2954140842
gdc.identifier.pmid 31279296 en_US
gdc.identifier.wos WOS:000486133100046 en_US
gdc.oaire.diamondjournal false
gdc.oaire.impulse 9.0
gdc.oaire.influence 3.219151E-9
gdc.oaire.isgreen true
gdc.oaire.keywords Azoles
gdc.oaire.keywords Models, Molecular
gdc.oaire.keywords Design
gdc.oaire.keywords Antifungal Agents
gdc.oaire.keywords Cell Survival
gdc.oaire.keywords Cytotoxicity
gdc.oaire.keywords Drug Evaluation, Preclinical
gdc.oaire.keywords Microbial Sensitivity Tests
gdc.oaire.keywords Crystallography, X-Ray
gdc.oaire.keywords Cell Line
gdc.oaire.keywords Structure-Activity Relationship
gdc.oaire.keywords Antifungal Activity
gdc.oaire.keywords Glide
gdc.oaire.keywords Candida albicans
gdc.oaire.keywords Drug Discovery
gdc.oaire.keywords Humans
gdc.oaire.keywords General Force-Field
gdc.oaire.keywords Cyp51
gdc.oaire.keywords Candida
gdc.oaire.keywords Molecular-Dynamics
gdc.oaire.keywords Dose-Response Relationship, Drug
gdc.oaire.keywords Molecular Structure
gdc.oaire.keywords Molecular dynamics simulations
gdc.oaire.keywords Protein
gdc.oaire.keywords Biofilm
gdc.oaire.keywords Accurate Docking
gdc.oaire.keywords Consensus scoring
gdc.oaire.keywords N/A
gdc.oaire.keywords Biofilms
gdc.oaire.keywords Constraints
gdc.oaire.keywords Molecular docking
gdc.oaire.keywords Derivatives
gdc.oaire.popularity 1.2139481E-8
gdc.oaire.publicfunded false
gdc.oaire.sciencefields 0301 basic medicine
gdc.oaire.sciencefields 03 medical and health sciences
gdc.oaire.sciencefields 0303 health sciences
gdc.openalex.fwci 1.654
gdc.openalex.normalizedpercentile 0.84
gdc.opencitations.count 17
gdc.plumx.crossrefcites 17
gdc.plumx.mendeley 34
gdc.plumx.pubmedcites 6
gdc.plumx.scopuscites 16
gdc.wos.citedcount 21
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relation.isOrgUnitOfPublication.latestForDiscovery b20623fc-1264-4244-9847-a4729ca7508c

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